{"id":70,"date":"2017-03-09T13:58:06","date_gmt":"2017-03-09T12:58:06","guid":{"rendered":"https:\/\/project.inria.fr\/cobcom\/?page_id=70"},"modified":"2022-05-10T12:14:03","modified_gmt":"2022-05-10T10:14:03","slug":"publications","status":"publish","type":"page","link":"https:\/\/project.inria.fr\/cobcom\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"<p><\/p>\n<ul>\n<li>2022\n<ul>\n<li>\n<a href=\"\">A Riemannian revisiting of structure-function mapping based on eigenmodes<\/a><br \/>\n<i>Samuel Deslauriers-Gauthier, Mauro Zucchelli, Hiba Laghrissi, Rachid Deriche<\/i><br \/>\nFrontiers in Neuroimaging &#8211; Brain Imaging Methods (2022)\n<\/li>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-03629113\">An Anisotropic 4D Filtering Approach to Recover Brain Activation From Paradigm-Free Functional MRI Data<\/a><br \/>\n<i>Isa Costantini, Rachid Deriche, Samuel Deslauriers-Gauthier<\/i><br \/>\nFrontiers in Neuroimaging &#8211; Brain Imaging Methods (2022)\n<\/li>\n<\/ul>\n<\/li>\n<li>2021\n<ul>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-03312453\">Brain Tissue Microstructure Characterization Using dMRI Based Autoencoder Neural-Networks<\/a><br \/>\n<i>Mauro Zucchelli, Samuel Deslauriers-Gauthier, Rachid Deriche<\/i><br \/>\nMICCAI International Workshop on Computational Diffusion MRI (2021)\n<\/li>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-03307031\">A spherical convolutional neural network for white matter structure imaging via dMRI<\/a><br \/>\n<i>Sara Sedlar, Abib Alimi, Th\u00e9odore Papadopoulo, Rachid Deriche, Samuel Deslauriers-Gauthier<\/i><br \/>\n24th International Conference on Medical Image Computing and Computer Assisted Intervention (2021)\n<\/li>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-02971361\">Explainable 3D-CNN for Multiple Sclerosis patients stratification<\/a><br \/>\n<i>Federica Cruciani, Lorenza Brusini, Mauro Zucchelli, Gustavo Retuci Pinheiro, Francesco Setti, Ilaria Boscolo Galazzo, Rachid Deriche, Leticia Rittner, Massimiliano Calabrese, Gloria Menegaz<\/i><br \/>\nPattern Recognition. ICPR International Workshops and Challenges (2021)\n<\/li>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-02971374\">Interpretable Deep Learning as a mean for decrypting disease signature in Multiple Sclerosis<\/a><br \/>\n<i>Federica Cruciani, Lorenza Brusini, Mauro Zucchelli, Gustavo Retuci Pinheiro, Francesco Setti, Ilaria Boscolo Galazzo, Rachid Deriche, Leticia Rittner, Massimiliano Calabrese, Gloria Menegaz<\/i><br \/>\nJournal of Neural Engineering (2021), <a href=\"https:\/\/doi.org\/10.1088\/1741-2552\/ac0f4b\">10.1088\/1741-2552\/ac0f4b<\/a>\n<\/li>\n<li>\n<a href=\"https:\/\/doi.org\/10.1101\/2021.03.02.433228\">On the generalizability of diffusion MRI signal representations across acquisition parameters, sequences and tissue types: chronicles of the MEMENTO challenge<\/a><br \/>\n<i>Alberto De Luca, Andrada Ianus, Alexander Leemans, Marco Palombo, Noam Shemesh, Hui Zhang, Daniel C Alexander, Markus Nilsson, Martijn Froeling, Geert-Jan Biessels, Mauro Zucchelli, Matteo Frigo, Enes Albay, Sara Sedlar, Abib Alimi, Samuel Deslauriers-Gauthier, Rachid Deriche, Rutger Fick, Maryam Afzali, Tomasz Pieciak, Fabian Bogusz, Santiago Aja-Fern\u00e1ndez, Evren Ozarslan, Derek K Jones, Haoze Chan, Mingwu Jin, Zhijie Zhang, Fengxiang Wang, Vishwesh Nath, Prasanna Parvathaneni, Jan Morez, Jan Sijbers, Ben Jeurissen, Shreyas Fadnavis, Stefan Endres, Ariel Rokem, Eleftherios Garyfallidis, Irina Sanchez, Vesna Prchkovska, Paulo Rodrigues, Bennet A Landman, Kurt G Schilling<\/i><br \/>\nNeuroImage (2021), <a href=\"https:\/\/doi.org\/10.1016\/j.neuroimage.2021.118367\">10.1016\/j.neuroimage.2021.118367<\/a>\n<\/li>\n<li id=\"nn2021\">\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-03033777\">Network alignment and similarity reveal atlas-based topological differences in structural connectomes<\/a><br \/>\n<i>Matteo Frigo, Emilio Cruciani, David Coudert, Rachid Deriche, Emanuele Natale, Samuel Deslauriers-Gauthier<\/i><br \/>\nNetwork Neuroscience (2021), <a href=\"https:\/\/doi.org\/10.1162\/netn_a_00199\">10.1162\/netn_a_00199<\/a>\n<\/li>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-03174220\">Investigating the effect of DMRI signal representation on fully-connected neural networks brain tissue microstructure estimation<\/a><br \/>\n<i>Mauro Zucchelli, Samuel Deslauriers-Gauthier, and Rachid Deriche<\/i><br \/>\nIEEE International Symposium on Biomedical Imaging (ISBI) (2021)\n<\/li>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-03143148\/\">Incorporating transmission delays supported by diffusion MRI in MEG source reconstruction<\/a><br \/>\n<i>Ivana Koj\u010di\u0107, Th\u00e9odore Papadopoulo, Rachid Deriche, and Samuel Deslauriers-Gauthier<\/i><br \/>\nIEEE International Symposium on Biomedical Imaging (ISBI) (2021)\n<\/li>\n<\/ul>\n<\/li>\n<li>2020\n<ul>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/tel-03021334\">Paradigm Free Regularization for fMRI Brain Activation Recovery<\/a><br \/>\n<i>Isa Costantini<\/i><br \/>\nThese, Universit\u00e9 C\u00f4te d&#8217;Azur\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/tel-03078802\">Three-dimensional Polarized Light Imaging: Towards Multiscale and Multimodal Analysis with Diffusion Magnetic Resonance Imaging<\/a><br \/>\n<i>Abib Alimi<\/i><br \/>\nThese, Universit\u00e9 C\u00f4te d&#8217;Azur\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-03006797\">A comprehensive study on electroencephalography and magnetoencephalography sensitivity to cortical and subcortical sources<\/a><br \/>\n<i> Maria Carla Piastra, Andreas N\u00fc\u00dfing, Johannes Vorwerk, Maureen Clerc, Christian Engwer, and Carsten Wolters<\/i><br \/>\nHuman Brain Mapping (2020), <a href=\"https:\/\/doi.org\/10.1002\/hbm.25272\">10.1002\/hbm.25272<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-02933646\/\">Fully-Connected Neural Network and Spherical-Harmonics Rotation Invariant Features improve the estimation of brain tissue microstructure in Diffusion MRI<\/a><br \/>\n<i>Mauro Zucchelli, Samuel Deslauriers-Gauthier, and Rachid Deriche<\/i><br \/>\nSophIA Summit (2020)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-02972198\">Diffusion MRI tractography filtering techniques change the topology of structural connectomes<\/a><br \/>\n<i>Matteo Frigo, Samuel Deslauriers-Gauthier, Drew Parker, Abdol Aziz Ould Ismail, Junghoon John Kim, Ragini Verma, and Rachid Deriche<\/i><br \/>\nJournal of Neural Engineering (2020), <a href=\"https:\/\/doi.org\/10.1088\/1741-2552\/abc29b\">10.1088\/1741-2552\/abc29b<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-02946371\/\">Diffusion MRI fiber orientation distribution function estimation using voxel-wise spherical U-net<\/a><br \/>\n<i>Sara Sedlar, Th\u00e9odore Papadopoulo, Rachid Deriche, Samuel Deslauriers-Gauthier<\/i><br \/>\nMICCAI Workshop on Computational Diffusion MRI (2020)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-03048832\/\">Quantitative assessment of multi-scale tractography: bridging the resolution gap with 3D-PLI<\/a><br \/>\n<i>Abib Alimi, Matteo Frigo, Samuel Deslauriers-Gauthier, and Rachid Deriche<\/i><br \/>\nInternational Society for Magnetic Resonance in Medicine (ISMRM) (2020)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-03021387\/document\">A Paradigm Free Regularization Approach to Recover Brain Activations: Validation on Task fMRI<\/a><br \/>\n<i>Isa Costantini, Samuel Deslauriers-Gauthier, and Rachid Deriche<\/i><br \/>\nInternational Society for Magnetic Resonance in Medicine (ISMRM) (2020)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-02925963\/document\">Multi-compartment modelling of diffusion MRI signal shows TE-based volume fraction bias<\/a><br \/>\n<i>Matteo Frigo, Mauro Zucchelli, Rutger Fick, Samuel Deslauriers-Gauthier, and Rachid Deriche<\/i><br \/>\nOrganization of Human Brain Mapping (OHBM) (2020)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-03078848\/\">Analytical and fast fiber orientation distribution reconstruction in 3d-polarized light imaging<\/a><br \/>\n<i>Abib Alimi, Samuel Deslauriers-Gauthier, Felix Matuschke, Andreas M\u00fcller, Sascha EA Muenzing, Markus Axer, and Rachid Deriche<\/i><br \/>\nMedical image analysis (2020), <a href=\"https:\/\/doi.org\/10.1016\/j.media.2020.101760\">10.1016\/j.media.2020.101760<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-02986430\/document\">Connectivity-informed M\/EEG inverse problem<\/a><br \/>\n<i>Ivana Koj\u010di\u0107, Th\u00e9odore Papadopoulo, Rachid Deriche, and Samuel Deslauriers-Gauthier<\/i><br \/>\nMICCAI Workshop on GRaphs in biomedicAl Image anaLysis (2020)\n<\/li>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-02925913\">A Unified Framework for Multimodal Structure-function Mapping Based on Eigenmodes<\/a><br \/>\n<i>Samuel Deslauriers-Gauthier, Mauro Zucchelli, Matteo Frigo, and Rachid Deriche<\/i><br \/>\nMedical Image Analysis (2020), <a href=\"https:\/\/doi.org\/10.1016\/j.media.2020.101799\">10.1016\/j.media.2020.101799<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-02925986\">A Unified Model for Structure\u2013function Mapping Based on Eigenmodes<\/a><br \/>\n<i>Samuel Deslauriers-Gauthier and Rachid Deriche<\/i><br \/>\nOrganisation for Humain Brain Mapping (OHBM) (2020)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-02925937\">Non-invasive inference of information flow using diffusion MRI, functional MRI, and MEG<\/a><br \/>\n<i>Samuel Deslauriers-Gauthier, Isa Costantini, and Rachid Deriche<\/i><br \/>\nJournal of Neural Engineering (2020), <a href=\"https:\/\/doi.org\/10.1088\/1741-2552\/ab95ec\">10.1088\/1741-2552\/ab95ec<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-02473542\">Multi Tissue Modelling of Diffusion MRI Signal Reveals Volume Fraction Bias<\/a><br \/>\n<i>Matteo Frigo, Rutger H. J. Fick, Mauro Zucchelli, Samuel Deslauriers-Gauthier, and Rachid Deriche<\/i><br \/>\nIEEE 17th International Symposium on Biomedical Imaging (2020), <a href=\"https:\/\/doi.org\/10.1109\/isbi45749.2020.9098649\">10.1109\/isbi45749.2020.9098649<\/a><br \/>\n<iframe loading=\"lazy\" width=\"560\" height=\"315\" src=\"https:\/\/www.youtube.com\/embed\/R5m8V263eJg\" frameborder=\"0\" allow=\"accelerometer; autoplay; encrypted-media; gyroscope; picture-in-picture\" allowfullscreen><\/iframe>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-02370077\">A Computational Framework For Generating Rotation Invariant Features And Its Application In Diffusion MRI<\/a><br \/>\n<i>Mauro Zucchelli, Samuel Deslauriers-Gauthier, and Rachid Deriche<\/i><br \/>\nMedical Image Analysis (2020), <a href=\"https:\/\/doi.org\/10.1016\/j.media.2019.101597\">10.1016\/j.media.2019.101597<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<\/ul>\n<\/li>\n<li>2019\n<ul>\n<li>\n<a href=\"http:\/\/www.theses.fr\/2019AZUR4112\">Nouvelles approches algorithmiques pour les probl\u00e8mes directs et inverses en M\/EEG<\/a><br \/>\n<i>Kostiantyn Maksymenko<\/i><br \/>\nThese, Universit\u00e9 C\u00f4te d&#8217;Azur\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-02401132\">Spatially Varying Monte Carlo Sure for the Regularization of Biomedical Images<\/a><br \/>\n<i>Marco Pizzolato, Rachid Deriche, Erick Jorge Canales-Rodriguez, Jean-Philippe Thiran<\/i><br \/>\nIEEE 16th International Symposium on Biomedical Imaging (2019), <a href=\"https:\/\/doi.org\/10.1109\/isbi.2019.8759338\">10.1109\/isbi.2019.8759338<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-02379744\">Connectivity\u2013informed spatio\u2013temporal MEG source reconstruction: Simulation results using a MAR model<\/a><br \/>\n<i>Ivana Koj\u010di\u0107, Th\u00e9odore Papadopoulo, Rachid Deriche, and Samuel Deslauriers-Gauthier<\/i><br \/>\nColloque Line Garnero (2019)\n<\/li>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-02279612\">Connectivity-informed solution for spatio-temporal M\/EEG source reconstruction<\/a><br \/>\n<i>Ivana Koj\u010di\u0107, Th\u00e9odore Papadopoulo, Rachid Deriche, and Samuel Deslauriers-Gauthier<\/i><br \/>\nFirst meeting of the NeuroMod Institute (2019)\n<\/li>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-02948387\">Spherical convolutional neural network for diffusion MRI analysis <\/a><br \/>\n<i> Sara Sedlar, Abib Alimi, Th\u00e9odore Papadopoulo, Rachid Deriche, and Samuel Deslauriers-Gauthier<\/i><br \/>\nSophIA Summit (2020)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S1053811919308651\">Adaptive phase correction of diffusion-weighted images<\/a><br \/>\n<i>Marco Pizzolato, Guillaume Gilbert, Jean-Philippe Thiran, Maxime Descoteaux, and Rachid Deriche<\/i><br \/>\nNeuroImage (2019)\n<\/li>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-02400877\">The Dmipy Toolbox: Diffusion MRI Multi-Compartment Modeling and Microstructure Recovery Made Easy<\/a><br \/>\n<i>Rutger H. J. Fick, Demian Wassermann, and Rachid Deriche<\/i><br \/>\nFrontiers in Neuro Informatics (2019), <a href=\"https:\/\/doi.org\/10.3389\/fninf.2019.00064\">10.3389\/fninf.2019.00064<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01890242\">Fast Approximation of EEG Forward Problem and Application to Tissue Conductivity Estimation<\/a><br \/>\n<i>Kostiantyn Maksymenko, Maureen Clerc, and Th\u00e9odore Papadopoulo<\/i><br \/>\nIEEE Transactions on Medical Imaging (2019), <a href=\"https:\/\/doi.org\/10.1109\/TMI.2019.2936921\">10.1109\/TMI.2019.2936921<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-02187859\">White matter information flow mapping from diffusion MRI and EEG<\/a><br \/>\n<i>Samuel Deslauriers-Gauthier, Jean-Marc Lina, Russell Butler, Kevin Whittingstall, Guillaume Gilbert, Pierre-Michel  Bernier, Rachid Deriche, and Maxime Descoteaux<\/i><br \/>\nNeuroImage, vol. 201 (2019), <a href=\"https:\/\/doi.org\/10.1016\/j.neuroimage.2019.116017\">10.1016\/j.neuroimage.2019.116017<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-02071193\">Deconvolution of fMRI Data using a Paradigm Free Iterative Approach based on Partial Differential Equations<\/a><br \/>\n<i>Isa Costantini, Samuel Deslauriers-Gauthier, and Rachid Deriche<\/i><br \/>\nOrganization for Human Brain Mapping Annual Meeting (2019) Italy\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-02074345\">Novel 4-D Algorithm for Functional MRI Image Regularization using Partial Differential Equations<\/a><br \/>\n<i>Isa Costantini, Samuel Deslauriers-Gauthier, Rachid Deriche<\/i><br \/>\nInternational Society for Magnetic Resonance in Medicine Annual Meeting and Exhibition (2019) Canada\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-02070912\">Towards validation of diffusion MRI tractography: bridging the resolution gap with 3D Polarized Light Imaging<\/a><br \/>\n<i>Abib Alimi, Samuel Deslauriers-Gauthier, and Rachid Deriche<\/i><br \/>\nInternational Society for Magnetic Resonance in Medicine Annual Meeting and Exhibition (2019)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-02071315\">A Novel Characterization of Traumatic Brain Injury in White Matter with Diffusion MRI Spherical-Harmonics Rotation Invariants<\/a><br \/>\n<i>Mauro Zucchelli, Drew Parker\u200b, Samuel Deslauriers-Gauthier, Junghoon Joh Kim, J Ragini Verma, and Rachid Deriche<\/i><br \/>\nInternational Society for Magnetic Resonance in Medicine Annual Meeting and Exhibition (2019)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01973588\">Coarse-Grained Spatiotemporal Acquisition Design for Diffusion MRI<\/a><br \/>\n<i>Patryk Filipiak, Rutger Fick, A. Petiet, M. Santin, A.-C. Philippe, S. Lehericy, Rachid Deriche, Demian Wassermann<\/i><br \/>\nProceedings of The IEEE International Symposium on Biomedical Imaging (2019), <a href=\"https:\/\/doi.org\/10.1109\/isbi.2019.8759195\">10.1109\/isbi.2019.8759195<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-02063396\">Estimation of Axonal Conduction Speed and the Inter Hemispheric Transfer Time using Connectivity Informed Maximum Entropy on the Mean<\/a><br \/>\n<i>Samuel Deslauriers-Gauthier and Rachid Deriche<\/i><br \/>\nSPIE Medical Imaging (2019), <a href=\"https:\/\/doi.org\/10.1117\/12.2511736\">10.1117\/12.2511736<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-02074059\">Estimation of Axon Conduction Delay, Conduction Speed, and Diameter from Information Flow using Diffusion MRI and MEG<\/a><br \/>\n<i>Samuel Deslauriers-Gauthier and Rachid Deriche<\/i><br \/>\nInternational Society for Magnetic Resonance in Medicine (2019)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-02056641\">Effects of tractography filtering on the topology and interpretability of connectomes<\/a><br \/>\n<i>Matteo Frigo, Samuel Deslauriers-Gauthier, Drew Parker, Abdol Aziz, Ould Ismail, Junghoon John Kim, Ragini Verma, and Rachid Deriche<\/i><br \/>\nOrganisation for Human Brain Mapping Annual Meeting (2019) Italy\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01988262\">Analytical Fiber ODF Reconstruction in 3D Polarized Light Imaging: Performance Assessment<\/a><br \/>\n<i>Abib Alimi, Samuel Deslauriers-Gauthier, Felix Matuschke, Daniel Schmitz, Markus Axer, and Rachid Deriche<\/i><br \/>\nIEEE International Symposium on Biomedical Imaging (2019), <a href=\"https:\/\/doi.org\/10.1109\/isbi.2019.8759298\">10.1109\/isbi.2019.8759298<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-01912555\">Fiber orientation distribution function from non-negative sparse recovery with quantitative analysis of local fiber orientations and tractography using DW-MRI datasets<\/a><br \/>\n<i>Thinhinane Megherbi, Gabriel Girard, Aurobrata Ghosh, Fatima Oulebsir-Boumghar, and Rachid Deriche<\/i><br \/>\nMagnetic Resonance Imaging 57 (2019) 218-234, <a href=\"https:\/\/doi.org\/10.1016\/j.mri.2018.10.003\">10.1016\/j.mri.2018.10.003<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01533363\">Solving the inclination sign ambiguity in three dimensional polarized light imaging with a pde-based method<\/a><br \/>\n<i>Abib Alimi, Marco Pizzolato, Rutger Fick, Rachid Deriche<\/i><br \/>\nIEEE 14th International Symposium on Biomedical Imaging (2017), <a href=\"https:\/\/doi.org\/10.1109\/isbi.2017.7950624\">10.1109\/isbi.2017.7950624<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<\/ul>\n<\/li>\n<li>2018\n<ul>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-02077006\">OpenMEEG software for forward problems, coping with non-nested geometries<\/a><br \/>\n<i>Clerc Maureen, Gramfort Alexandre, Papadopoulo Th\u00e9odore<\/i><br \/>\n21st International Conference on Biomagnetism (2018)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-01831823\">Investigating Diffusion-MRI based neurite density estimation model dependency: an in-vivo study on the HCP dataset<\/a><br \/>\n<i>Mauro Zucchelli, Maxime Descoteaux, Gloria Menegaz<\/i><br \/>\nBIOMAG (2018)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01719646\">Spatio-Temporal dMRI Acquisition Design: Reducing the Number of Samples<\/a><br \/>\n<i>Patryk Filipiak, Rutger Fick, Alexandra Petiet, Mathieu Santin, Anne-Charlotte Philippe, St\u00e9phane Leh\u00e9ricy, Rachid Deriche, Demian Wassermann<\/i><br \/>\nInternational Society for Magnetic Resonance in Medicine (2018)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01719646\">Spatio-Temporal dMRI Acquisition Design: Reducing the Number of Samples<\/a><br \/>\n<i>Patryk Filipiak, Rutger Fick, Alexandra Petiet, Mathieu Santin, Anne-Charlotte Philippe, St\u00e9phane Leh\u00e9ricy, Rachid Deriche, Demian Wassermann<\/i><br \/>\nInternational Society for Magnetic Resonance in Medicine (2018)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01723846v1\">Towards the assessment of myelination using time-dependent diffusion MRI indices<\/a><br \/>\n<i>Abib Alimi, Alexandra Petiet, Mathieu Santin, Anne-Charlotte Philippe, St\u00e9phane Leh\u00e9ricy, Rachid Deriche, and Demian Wassermann<\/i><br \/>\nInternational Society for Magnetic Resonance in Medicine (2018)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01873353\">Dmipy, a Diffusion Microstructure Imaging toolbox in Python to improve research reproducibility<\/a><br \/>\n<i>Abib Alimi, Rutger Fick, Demian Wassermann, and Rachid Deriche<\/i><br \/>\nComputational Diffusion MRI (2018), <a href=\"https:\/\/doi.org\/10.1007\/978-3-030-05831-9_5\">10.1007\/978-3-030-05831-9_5<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01946876\">Data-driven cortical clustering to provide a family of plausible solutions to M\/EEG inverse problem<\/a><br \/>\n<i>Kostiantyn Maksymenko, Maureen Clerc, and Th\u00e9odore Papadopoulo<\/i><br \/>\nInternational Traveling Workshop on Interactions between low-complexity data models and Sensing Techniques (2018)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01855505\">L1-Norm Regularized Deconvolution of Functional MRI BOLD Signal<\/a><br \/>\n<i>Isa Costantini , Patryk Filipiak , Kostiantyn Maksymenko , Samuel Deslauriers-Gauthier, and Rachid Deriche<\/i><br \/>\nC@UCA (2018) France\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01912148\">A Closed-Form Solution of Rotation Invariant Spherical Harmonic Features in Diffusion MRI<\/a><br \/>\n<i>Mauro Zucchelli, Samuel Deslauriers-Gauthier, Rachid Deriche<\/i><br \/>\nComputational Diffusion MRI (2018), <a href=\"https:\/\/doi.org\/10.1007\/978-3-030-05831-9_7\">10.1007\/978-3-030-05831-9_7<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01864939\">Resolving the crossing\/kissing fiber ambiguity using Functionally Informed COMMIT<\/a><br \/>\n<i>Matteo Frigo, Isa Costantini, Rachid Deriche, and Samuel Deslauriers-Gauthier<\/i><br \/>\nComputational Diffusion MRI 2018 (2018), <a href=\"https:\/\/doi.org\/10.1007\/978-3-030-05831-9_26\">10.1007\/978-3-030-05831-9_26<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01893110\">Edema-informed anatomically constrained particle filter tractography<\/a><br \/>\n<i>Samuel Deslauriers-Gauthier, Drew Parker, Fran\u00e7ois Rheault, Rachid Deriche, Steven Brem, Maxime Descoteaux, and Ragini Verma<\/i><br \/>\nInternational Conference on Medical Image Computing and Computer-Assisted Intervention (2018) Spain 375-382\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-01935684\">Solving the Cross-Subject Parcel Matching Problem using Optimal Transport<\/a><br \/>\n<i>Guillermo Gallardo, Nathalie TH Gayraud, Rachid Deriche, Maureen Clerc, Samuel Deslauriers-Gauthier, and Demian Wassermann<\/i><br \/>\nInternational Conference on Medical Image Computing and Computer-Assisted Intervention (2018) 836-843\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-01928734\">Reducing the number of samples in spatiotemporal dMRI acquisition design<\/a><br \/>\n<i>Patryk Filipiak, Rutger Fick, Alexandra Petiet, Mathieu Santin, Anne-Charlotte Philippe, Stephane Lehericy, Philippe Ciuciu, Rachid Deriche, and Demian Wassermann<\/i><br \/>\nMagnetic Resonance in Medicine (2018) 1-16, <a href=\"https:\/\/doi.org\/10.1002\/mrm.27601\">10.1002\/mrm.27601<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01855467\">fMRI Deconvolution via Temporal Regularization using a LASSO model and the LARS algorithm<\/a><br \/>\n<i>Isa Costantini, Patryk Filipiak, Kostiantyn Maksymenko, Samuel Deslauriers-Gauthier, and Rachid Deriche<\/i><br \/>\nIn 40th International Engineering in Medicine and Biology Conference (2018) USA\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-01737434\">Reducing false positive connection in tractograms using joint structure-function filtering<\/a><br \/>\n<i>Matteo Frigo, Guillermo Gallardo, Isa Constantini, Alessandro Daducci, Demian Wassermann, Rachid Deriche, and Samuel Deslauriers-Gauthier<\/i><br \/>\nOrganization for Human Brain Mapping Annual Meeting (2018) Singapore\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-01722146\">Mipy: An Open-Source Framework to improve reproducibility in Brain Microstructure Imaging<\/a><br \/>\n<i>Rutger Fick, Demian Wassermann, and Rachid Deriche<\/i><br \/>\nOrganization for Human Brain Mapping Annual Meeting (2018) Singapore\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01578296\/document\">Non-parametric graphnet-regularized representation of dMRI in space and time<\/a><br \/>\n<i>Rutger H.J. Fick, Alexandra Petiet, Mathieu Santin, Anne-Charlotte Philippe, Stephane Lehericy, Rachid Deriche, and Demian Wassermann<\/i><br \/>\nMedical Image Analysis 43 (2018) 37-53, <a href=\"https:\/\/doi.org\/10.1016\/j.media.2017.09.002\">10.1016\/j.media.2017.09.002<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01570853\">Rational Invariants of Even Ternary Forms Under the Orthogonal Group<\/a><br \/>\n<i>Paul G\u00f6rlach, Evelyne Hubert, and Th\u00e9o Papadopoulo<\/i><br \/>\nFoundations of Computational Mathematics (2018) 1-47, <a href=\"https:\/\/doi.org\/10.1007\/s10208-018-9404-1\">10.1007\/s10208-018-9404-1<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-01737422\">Diffusion Driven Label Fusion for White Matter Multi-Atlas Segmentation<\/a><br \/>\n<i>Guillermo Gallardo , Sylvain Bouix, and Demian Wassermann<\/i><br \/>\nOrganization for Human Brain Mapping Annual Meeting (2018)\n<\/li>\n<p><!-- done --><\/p>\n<\/ul>\n<\/li>\n<li>2017\n<ul>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01713304\">Matching parcellations using Optimal Transport: a proof of concept<\/a><br \/>\n<i>Guillermo Gallardo, Nathalie Th\u00e9r\u00e8se H\u00e9l\u00e8ne Gayraud, Maureen Clerc, Demian Wassermann<\/a><br \/>\nComputational Brain Connectivity Mapping Winter School Workshop (2017)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01713304\">Deconvolution of fMRI BOLD signal in time-domain using an exponential operator and Lasso optimization<\/a><br \/>\n<i>Isa Costantini, Patryk Filipiak, Kostiantyn Maksymenko, Rachid Deriche, and Samuel Deslauriers-Gauthier<\/a><br \/>\nComputational Brain Connectivity Mapping Winter School Workshop (2017)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01659253\">Regularizing the ODF estimate with the Laplace-Beltrami operator in 3D Polarized Light Imaging<\/a><br \/>\n<i>Abib Alimi, Samuel Deslauriers-Gauthier, and Rachid Deriche<\/i><br \/>\nComputational Brain Connectivity Mapping Winter School Workshop (2017)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01713075\">White matter fiber bundles as a source model in the MEG inverse problem<\/a><br \/>\n<i>Kostiantyn Maksymenko, Th\u00e9odore Papadopoulo, and Samuel Deslauriers-Gauthier<\/i><br \/>\nComputational Brain Connectivity Mapping Winter School Workshop (2017)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-01468214\">Multi-Spherical Diffusion MRI: An in-vivo Test- Retest Study of Time-Dependent q-space Indices<\/a><br \/>\n<i>Rutger Fick, Alexandra Petiet, Mathieu Santin, Anne-Charlotte Philippe, Stephane Lehericy, Rachid Deriche, and Demian Wassermann<\/i><br \/>\nISMRM 25th Annual Meeting &#038; Exhibition (2017)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-01451664\">Assessing the feasibility of estimating axon diameter using diffusion models and machine learning<\/a><br \/>\n<i>Rutger H.J. Fick, Neda Sepasian, Marco Pizzolato, Andrada Ianus, and Rachid Deriche<\/i><br \/>\nIEEE 14th International Symposium on Biomedical Imaging (2017) 766-769, <a href=\"https:\/\/doi.org\/10.1109\/ISBI.2017.7950631\">10.1109\/ISBI.2017.7950631<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01548428\">Adaptive Waveform Learning: A Framework for Modeling Variability in Neurophysiological Signals<\/a><br \/>\n<i>Sebastian Hitziger, Maureen Clerc, Sandrine Saillet, Christian Benar, and Theodore Papadopoulo<\/i><br \/>\nIEEE Transactions on Signal Processing 65 (2017) 4324-4338, <a href=\"https:\/\/doi.org\/10.1109\/TSP.2017.2698415\">10.1109\/TSP.2017.2698415<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-01500472\">Diffusion MRI microstructure models with in vivo human brain Connectome data: results from a multi-group comparison<\/a><br \/>\n<i>Uran Ferizi, Benoit Scherrer, Torben Schneider, Mohammad Alipoor, Odin Eufracio, Rutger H.J. Fick, Rachid Deriche, Markus Nilsson, Ana K. Loya-Olivas, Mariano Rivera, Dirk H.J. Poot, Alonso Ramirez-Manzanares, Jose L. Marroquin, Ariel Rokem, Christian P\u00f6tter, Robert F. Dougherty, Ken Sakaie, Claudia Wheeler-Kingshott, Simon K. Warfield, Thomas Witzel, Lawrence L. Wald, Jos\u00e9 G. Raya, and Daniel C. Alexander<\/i><br \/>\nNMR in Biomedicine 30 (2017) e3734, <a href=\"https:\/\/doi.org\/10.1002\/nbm.3734\">10.1002\/nbm.3734<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01533396\">Spatial regularization based on dMRI to solve EEG\/MEG inverse problem<\/a><br \/>\n<i>Brahim Belaoucha and Theodore Papadopoulo<\/i><br \/>\n39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (2017) 3608-3611, <a href=\"https:\/\/doi.org\/10.1109\/EMBC.2017.8037638\">10.1109\/EMBC.2017.8037638<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-01468675\">Diffusion MRI Anisotropy: Modeling, Analysis and Interpretation<\/a><br \/>\n<i>Rutger Fick, Marco Pizzolato, Demian Wassermann, and Rachid Deriche<\/i><br \/>\nBook chapter in Modeling, Analysis, and Visualization of Anisotropy (2017) 203-228, <a href=\"https:\/\/doi.org\/10.1007\/978-3-319-61358-1_9\">10.1007\/978-3-319-61358-1_9<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-01734650\/\">Using diffusion MRI to discriminate areas of cortical grey matter<\/a><br \/>\n<i>Tharindu Ganepola, Zoltan Nagy, Aurobrata Ghosh, Theodore Papadopoulo, Daniel C. Alexander, and Martin I. Sereno<\/i><br \/>\nNeuroImage 17 (2017), <a href=\"https:\/\/doi.org\/10.1016\/j.neuroimage.2017.12.046\">10.1016\/j.neuroimage.2017.12.046<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01533445\">Large brain effective network from EEG\/MEG data and dMR information<\/a><br \/>\n<i>Brahim Belaoucha and Theodore Papadopoulo<\/i><br \/>\nInternational Workshop on Pattern Recognition in Neuroimaging (2017) 1-4, <a href=\"https:\/\/doi.org\/10.1109\/PRNI.2017.7981511\">10.1109\/PRNI.2017.7981511<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-01426870\/\">Extracting the Groupwise Core Structural Connectivity Network: Bridging Statistical and Graph-Theoretical Approaches<\/a><br \/>\n<i>Nahuel Lascano, Guillermo Gallardo, Rachid Deriche, Dorian Mazauric, and Demian Wassermann<\/i><br \/>\nIPMI: Information Processing in Medical Imaging (2017) 373-384, <a href=\"https:\/\/doi.org\/10.1007\/978-3-319-59050-9_30\">10.1007\/978-3-319-59050-9_30<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/tel-01534104\/\">Advanced dMRI signal modeling for tissue microstructure characterization<\/a><br \/>\n<i>Rutger H.J. Fick<\/i><br \/>\nPh.D. Thesis Universit\u00e9 C\u00f4te d&#8217;Azur (2017)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-01556352\">Inference and Visualization of Information Flow in the Visual Pathway Using dMRI and EEG<\/a><br \/>\n<i>Samuel Deslauriers-Gauthier, Jean-Marc Lina, Russell Butler, Pierre-Michel Bernier, Kevin Whittingstall, Rachid Deriche, and Maxime Descoteaux<\/i><br \/>\nInternational Conference on Medical Image Computing and Computer-Assisted Intervention (2017) 505-512, <a href=\"https:\/\/doi.org\/10.1007\/978-3-319-66182-7_58\">10.1007\/978-3-319-66182-7_58<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01562617v3\/document\">Spatio-Temporal dMRI Acquisition Design: Reducing the Number of qt Samples Through a Relaxed Probabilistic Model<\/a><br \/>\n<i>Patryk Filipiak, Rutger Fick, Alexandra Petiet, Mathieu Santin, Anne-Charlotte Philippe, Stephane Lehericy, Rachid Deriche, and Demian Wassermann<\/i><br \/>\nMICCAI Workshop on Computational Diffusion MRI (2017), <a href=\"https:\/\/doi.org\/10.1007\/978-3-319-73839-0_3\">10.1007\/978-3-319-73839-0_3<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-01534978\">Information Flow in the white matter during a motor task: A structural connectivity driven approach<\/a><br \/>\n<i>Guillermo Gallardo, Demian Wassermann, Rachid Deriche, Maxime Descoteaux, and Samuel Deslauriers-Gauthier<\/i><br \/>\nOrganization for Human Brain Mapping Annual Meeting (2017)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-01426625\">Groupwise structural parcellation of the whole cortex: A logistic random effects model based approach<\/a><br \/>\n<i>Guillermo Gallardo, William Wells, Rachid Deriche, and Demian Wassermann<\/i><br \/>\nNeuroImage 170 (2017) 307-320, <a href=\"https:\/\/doi.org\/10.1016\/j.neuroimage.2017.01.070\">10.1016\/j.neuroimage.2017.01.070<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01564041\">AxTract: Toward microstructure informed tractography<\/a><br \/>\n<i>Gabriel Girard, Alessandro Daducci, Laurent Petit, Jean-Philippe Thiran, Kevin Whittingstall, Rachid Deriche, Demian Wassermann, and Maxime Descoteaux<\/i><br \/>\nHuman Brain Mapping 38 (2017) 5485-5500, <a href=\"https:\/\/doi.org\/10.1002\/hbm.23741\">10.1002\/hbm.23741<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-01533516\">A Novel Atlas of Human Cerebral Cortex based on Extrinsic Connectivity<\/a><br \/>\n<i>Guillermo Gallardo, Rachid Deriche, and Demian Wassermann<\/i><br \/>\nOrganization for Human Brain Mapping Annual Meeting (2017)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-01354981\">Comparison of Biomarkers in Transgenic Alzheimer Rats Using Multi-Shell Diffusion MRI<\/a><br \/>\n<i>Rutger H. J. Fick, Madelaine Daianu, Marco Pizzolato, Demian Wassermann, Russell E. Jacobs, Paul M. Thompson, Terrence Town, and Rachid Deriche<\/i><br \/>\nComputational Diffusion MRI (2017), <a href=\"https:\/\/doi.org\/10.1007\/978-3-319-54130-3_16\">10.1007\/978-3-319-54130-3_16<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<\/ul>\n<\/li>\n<li>2016\n<ul>\n<li>\n<a href=\"https:\/\/hal.inria.fr\/hal-01333301\">Extracting the Core Structural Connectivity Network: Guaranteeing Network Connectedness Through a Graph-Theoretical Approach<\/a><br \/>\n<i>Demian Wassermann, Dorian Mazauric, Guillermo Gallardo-Diez, and Rachid Deriche<\/i><br \/>\nMedical Image Computing and Computer-Assisted Intervention (2016) 89-96, <a href=\"https:\/\/doi.org\/10.1007\/978-3-319-46720-7_11\">10.1007\/978-3-319-46720-7_11<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-01354985\">Multi-Spherical Diffusion MRI: Exploring Diffusion Time Using Signal Sparsity<\/a><br \/>\n<i>Rutger H. J. Fick, Alexandra Petiet, Mathieu Santin, Anne-Charlotte Philippe, Stephane Lehericy, Rachid Deriche, and Demian Wassermann<\/i><br \/>\nMICCAI Workshop on computational diffusion MRI (2016) 71-83, <a href=\"https:\/\/doi.org\/10.1007\/978-3-319-54130-3_6\">10.1007\/978-3-319-54130-3_6<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-01358436\">Groupwise Structural Parcellation of the Cortex: A Sound Approach Based on Logistic Models<\/a><br \/>\n<i>Guillermo Gallardo, Rutger Fick, William Wells, Rachid Deriche, and Demian Wassermann<\/i><br \/>\nMICCAI Workshop on Computational Diffusion MRI (2016) 99-112, <a href=\"https:\/\/doi.org\/10.1007\/978-3-319-54130-3_8\">10.1007\/978-3-319-54130-3_8<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-01377967\">Iterative two-stage approach to estimate sources and their interactions<\/a><br \/>\n<i>Brahim Belaoucha and Th\u00e9odore Papadopoulo<\/i><br \/>\n20th International Conference on Biomagnetism (2016)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-01360440\">Multi-Spherical MRI: Breaking the Boundaries of Diffusion Time<\/a><br \/>\n<i>Rutger Fick, Alexandra Petiet, Mathieu Santin, Anne-Charlotte Philippe, St\u00e9phane Lehericy, Rachid Deriche, and Demian Wassermann<\/i><br \/>\nISMRM Workshop on: Breaking the Barriers of Diffusion MRI (2016)\n<\/li>\n<p><!-- done --><\/p>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-01335669\">Computational Brain Connectivity Mapping: A Core Health and Scientific Challenge<\/a><br \/>\n<i>Rachid Deriche<\/i><br \/>\nMedical Image Analysis 33 (2016) 122\u2013126, <a href=\"https:\/\/www.doi.org\/10.1016\/j.media.2016.06.003\">10.1016\/j.media.2016.06.003<\/a>\n<\/li>\n<p><!-- done --><\/p>\n<\/ul>\n<\/li>\n<li>Preprints\n<ul>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-03046243\">Improving Auto-Encoders&#8217; self-supervised image classification using pseudo-labelling via data augmentation and the perceptual loss<\/a><br \/>\n<i>Aymene Mohammed Bouayed, Karim Atif, Rachid Deriche, and Abdelhakim Saim<\/i>\n<\/li>\n<li>\n<a href=\"https:\/\/hal.archives-ouvertes.fr\/hal-03125887\">Multi-Tissue Multi-Compartment Models of Diffusion MRI<\/a><br \/>\n<i>Matteo Frigo, Rutger Fick, Mauro Zucchelli, Samuel Deslauriers-Gauthier, Rachid Deriche<\/i>\n<\/li>\n<\/ul>\n<\/li>\n<\/ul>\n<p><\/p>","protected":false},"excerpt":{"rendered":"<p>2022 A Riemannian revisiting of structure-function mapping based on eigenmodes Samuel Deslauriers-Gauthier, Mauro Zucchelli, Hiba Laghrissi, Rachid Deriche Frontiers in Neuroimaging &#8211; Brain Imaging Methods (2022) An Anisotropic 4D Filtering Approach to Recover Brain Activation From Paradigm-Free Functional MRI Data Isa Costantini, Rachid Deriche, Samuel Deslauriers-Gauthier Frontiers in Neuroimaging &#8211;\u2026<\/p>\n<p> <a class=\"continue-reading-link\" href=\"https:\/\/project.inria.fr\/cobcom\/publications\/\"><span>Continue reading<\/span><i class=\"crycon-right-dir\"><\/i><\/a> <\/p>\n","protected":false},"author":1185,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-70","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/project.inria.fr\/cobcom\/wp-json\/wp\/v2\/pages\/70","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/project.inria.fr\/cobcom\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/project.inria.fr\/cobcom\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/project.inria.fr\/cobcom\/wp-json\/wp\/v2\/users\/1185"}],"replies":[{"embeddable":true,"href":"https:\/\/project.inria.fr\/cobcom\/wp-json\/wp\/v2\/comments?post=70"}],"version-history":[{"count":131,"href":"https:\/\/project.inria.fr\/cobcom\/wp-json\/wp\/v2\/pages\/70\/revisions"}],"predecessor-version":[{"id":341,"href":"https:\/\/project.inria.fr\/cobcom\/wp-json\/wp\/v2\/pages\/70\/revisions\/341"}],"wp:attachment":[{"href":"https:\/\/project.inria.fr\/cobcom\/wp-json\/wp\/v2\/media?parent=70"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}