

{"id":19,"date":"2014-12-08T22:26:17","date_gmt":"2014-12-08T22:26:17","guid":{"rendered":"https:\/\/compsysbio.inria.fr\/?page_id=19"},"modified":"2025-10-01T10:28:05","modified_gmt":"2025-10-01T08:28:05","slug":"program","status":"publish","type":"page","link":"https:\/\/project.inria.fr\/compsysbio2025\/program\/","title":{"rendered":"Program"},"content":{"rendered":"<p>Program can be found <a href=\"http:\/\/project.inria.fr\/compsysbio2025\/files\/2025\/10\/CompSysBio2025_Program_300925.pdf\">here<\/a><\/p>\n<p>Poster session assignment <a href=\"http:\/\/project.inria.fr\/compsysbio2025\/files\/2025\/10\/Poster.pdf\">here<\/a><\/p>\n<h4><strong>Keynote lectures<\/strong><\/h4>\n<h6><strong><a href=\"https:\/\/imsb.ethz.ch\/research\/picotti\/PeoplePicotti\/paola-picotti.html\"><span class=\"author-a-qgz85zz70zdmb2tb0z82z5z77z9t b\">Paola Picotti<\/span><\/a><\/strong><br \/><em>Decoding the protein dance<\/em><\/h6>\n<h6><strong><a href=\"https:\/\/bsse.ethz.ch\/ctsb\"><span class=\"author-a-qgz85zz70zdmb2tb0z82z5z77z9t b\">Mustafa Khammash<\/span><\/a><\/strong><br \/><em>Programming biology: from control theory to living therapeutics<\/em><\/h6>\n<h4><strong>Plenary lectures<\/strong><\/h4>\n<h5>Multi-scale and spatio-temporal modeling<\/h5>\n<h6><strong><a href=\"https:\/\/www.bristol.ac.uk\/people\/person\/Lucia-Marucci-8de3a95c-6f5e-4c4a-9850-cba01fd70edd\/\"><span class=\"author-a-qgz85zz70zdmb2tb0z82z5z77z9t b\">Lucia Marucci<\/span><\/a><\/strong><br \/>Programming cells using feedback control and whole-cell modelling<\/h6>\n<h6><strong><a href=\"https:\/\/micromotility.com\"><span class=\"author-a-qgz85zz70zdmb2tb0z82z5z77z9t b\">Kirsty Wan<\/span><\/a><\/strong><br \/>Decoding microscale navigation through integrative biophysical modelling<\/h6>\n<h5>Machine learning and AI for systems biology<\/h5>\n<h6><strong><a href=\"https:\/\/research.pasteur.fr\/en\/member\/laura-cantini\/\"><span class=\"author-a-qgz85zz70zdmb2tb0z82z5z77z9t b\">Laura Cantini<\/span><\/a><\/strong><br \/><em>Multi-modal learning for single-cell multi-omics integration<\/em><\/h6>\n<h6><strong><a href=\"https:\/\/profiles.imperial.ac.uk\/b.bravi21\"><span class=\"author-a-qgz85zz70zdmb2tb0z82z5z77z9t b\">Barbara Bravi<\/span><\/a><\/strong><br \/><em>Machine learning models for immune protein interactions<\/em><\/h6>\n<h5>Evolution, Genetics and molecular networks<\/h5>\n<h6><strong><a href=\"https:\/\/biology.ed.ac.uk\/alexander\"><span class=\"author-a-qgz85zz70zdmb2tb0z82z5z77z9t b\">Helen Alexander<\/span><\/a><\/strong><br \/><em>Quantifying stochastic events in evolution<\/em><\/h6>\n<h6><strong><a href=\"https:\/\/www.mpi-magdeburg.mpg.de\/arb\"><span class=\"author-a-qgz85zz70zdmb2tb0z82z5z77z9t b\">Steffen Klamt<\/span><\/a><\/strong><br \/><em>Using mathematical modeling to understand and rationally engineer the microbial metabolism<\/em><\/h6>\n<h6><strong><a href=\"https:\/\/www.ibps.sorbonne-universite.fr\/fr\/Recherche\/umr-7238\/Proteome-Diversification-Evolution\"><span class=\"author-a-qgz85zz70zdmb2tb0z82z5z77z9t b\">Elodie Laine<\/span><\/a><\/strong><br \/><em>From sparse static protein snapshots to continuous motions<\/em><\/h6>\n<h5>Dynamical and stochastic systems<\/h5>\n<h6><strong><a href=\"https:\/\/www.mdc-berlin.de\/wolf\"><span class=\"author-a-qgz85zz70zdmb2tb0z82z5z77z9t b\">Jana Wolf<\/span><\/a><\/strong><br \/><em>Modeling signal transduction and gene expression in cancer: from information processing to patient specific models<\/em><\/h6>\n<h6><strong><a href=\"https:\/\/zechnerlab.wordpress.com\"><span class=\"author-a-qgz85zz70zdmb2tb0z82z5z77z9t b\">Christoph Zechner<\/span><\/a><\/strong><br \/><em>Exploiting molecular fluctuations to understand chromatin dynamics and transcription in single cells<\/em><\/h6>\n<h6><strong><a href=\"https:\/\/institutmichelserres.fr\/in-english\/\"><strong><span class=\"author-a-qgz85zz70zdmb2tb0z82z5z77z9t b\">Olivier Hamant<\/span><\/strong><\/a><\/strong><br \/><em>How to build a plant? Fluctuations!<\/em><\/h6>\n<h4><strong>Afternoon blackboard teaching and hands-on sessions (more <a href=\"https:\/\/project.inria.fr\/compsysbio2025\/blackboard-teaching-and-computer-practicals\/\">here<\/a>)<\/strong><\/h4>\n<h6><strong><a href=\"https:\/\/utc.ulb.be\/dgonze.html\" target=\"_blank\" rel=\"noopener\">Didier Gonze<\/a><\/strong><br \/><i>Deterministic and stochastic modeling of circadian clocks<\/i><\/h6>\n<h6><strong><a href=\"https:\/\/team.inria.fr\/microcosme\/hidde-de-jong\/\" target=\"_blank\" rel=\"noopener\">Hidde de Jong<\/a><\/strong><br \/><i>Dynamical models integrating metabolism and gene expression<\/i><\/h6>\n<h6><strong><a href=\"https:\/\/chemnet.univie.ac.at\/team\/diana-szeliova\/\" target=\"_blank\" rel=\"noopener\">Diana Sz\u00e9liova<\/a> &amp; <a href=\"https:\/\/www.researchgate.net\/profile\/Hugo-Dourado-3\">Hugo Dourado<\/a><\/strong><br \/><em>Optimal allocation of enzyme resources in cells &amp; Introduction to Growth Balance Analysis<\/em><\/h6>\n<h6><strong><a href=\"https:\/\/www.slcu.cam.ac.uk\/people\/francois-nedelec\" target=\"_blank\" rel=\"noopener\">Fran\u00e7ois Nedelec<\/a><\/strong><br \/><i>Cytoskeleton simulations<\/i><\/h6>\n<h6><strong><a href=\"https:\/\/herbach.perso.math.cnrs.fr\" target=\"_blank\" rel=\"noopener\">Ulysse Herbach<\/a> &amp; <a href=\"https:\/\/eliasventre.github.io\" target=\"_blank\" rel=\"noopener\">Elias Ventre<\/a><\/strong><br \/><i>Simulation and reverse-engineering of mechanistic GRN-driven models of gene expression<\/i><\/h6>\n<h6><strong><a href=\"https:\/\/magrichard.github.io\/index.html\" target=\"_blank\" rel=\"noopener\">Magali Richard <\/a>&amp; <a href=\"https:\/\/franckpicard.github.io\">Franck Picard<\/a><\/strong><br \/><i>Statistical analysis of single cell data<\/i><\/h6>\n<h6><strong><a href=\"https:\/\/www.ens-lyon.fr\/PHYSIQUE\/presentation\/annuaire\/vaillant-cedric\" target=\"_blank\" rel=\"noopener\">C\u00e9dric Vaillant<\/a> &amp; <a href=\"https:\/\/www.ens-lyon.fr\/LBMC\/equipes\/biologie-physique-de-la-chromatine?set_language=en&amp;cl=en\">Daniel Jost<\/a><\/strong><br \/><i>Multi-scale modeling of chromatin<\/i><\/h6>\n<h6><strong><a href=\"https:\/\/homepages.inf.ed.ac.uk\/aweisse\/\" target=\"_blank\" rel=\"noopener\">Andrea Weisse<\/a><\/strong><br \/><i>Modeling adaptative cellular growth<\/i><\/h6>\n\n\n<p><\/p>","protected":false},"excerpt":{"rendered":"<p>Program can be found here Poster session assignment here Keynote lectures Paola PicottiDecoding the protein dance Mustafa KhammashProgramming biology: from control theory to living therapeutics Plenary lectures Multi-scale and spatio-temporal modeling Lucia MarucciProgramming cells using feedback control and whole-cell modelling Kirsty WanDecoding microscale navigation through integrative biophysical modelling Machine learning\u2026<\/p>\n<p> <a class=\"continue-reading-link\" href=\"https:\/\/project.inria.fr\/compsysbio2025\/program\/\"><span>Continue reading<\/span><i class=\"crycon-right-dir\"><\/i><\/a> <\/p>\n","protected":false},"author":935,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-19","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/project.inria.fr\/compsysbio2025\/wp-json\/wp\/v2\/pages\/19","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/project.inria.fr\/compsysbio2025\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/project.inria.fr\/compsysbio2025\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/project.inria.fr\/compsysbio2025\/wp-json\/wp\/v2\/users\/935"}],"replies":[{"embeddable":true,"href":"https:\/\/project.inria.fr\/compsysbio2025\/wp-json\/wp\/v2\/comments?post=19"}],"version-history":[{"count":86,"href":"https:\/\/project.inria.fr\/compsysbio2025\/wp-json\/wp\/v2\/pages\/19\/revisions"}],"predecessor-version":[{"id":1158,"href":"https:\/\/project.inria.fr\/compsysbio2025\/wp-json\/wp\/v2\/pages\/19\/revisions\/1158"}],"wp:attachment":[{"href":"https:\/\/project.inria.fr\/compsysbio2025\/wp-json\/wp\/v2\/media?parent=19"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}