{"id":88,"date":"2020-12-09T18:24:56","date_gmt":"2020-12-09T17:24:56","guid":{"rendered":"https:\/\/project.inria.fr\/ctrlab\/?page_id=88"},"modified":"2025-12-09T09:55:21","modified_gmt":"2025-12-09T08:55:21","slug":"publications","status":"publish","type":"page","link":"https:\/\/project.inria.fr\/ctrlab\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"<ul class=\"wp-block-list\">\n<li>Rand Asswad, Walid Djema, Olivier Bernard, Jean-Luc Gouz\u00e9, Eugenio Cinquemani (under review), Optimal Control of Vitamin-Mediated Algal-Bacterial Co-Cultures under Optogenetic Regulation, Journal paper.<\/li>\n\n\n\n<li>Rand Asswad, Jean-Luc Gouz\u00e9, Eugenio Cinquemani (2025). Single- and multi-objective performance optimization of an algal-bacterial synthetic process. CDC 2025 \u2013 64rd IEEE Conference on Decision and Control, IEEE CSS, Dec 2025, Rio de Janeiro, Brazil, to appear. <a href=\"https:\/\/inria.hal.science\/hal-05229706v2\">[Hal preprint]<\/a><\/li>\n\n\n\n<li>J. Innerarity Imizcoz, W. Djema, F. Mairet, J.-L. Gouz\u00e9 (2025). Optimal control of a microbial growth model by means of substrate concentration and resource allocation. DYCOPS 2025 &#8211; 14th IFAC Symposium on Dynamics and Control of Process Systems, including Biosystems, 2025, Bratislava, Slovakia. pp.528-533, \u27e810.1016\/j.ifacol.2025.07.200\u27e9 <a href=\"https:\/\/inria.hal.science\/hal-05249901v1\">[Hal preprint]<\/a><\/li>\n\n\n\n<li>Thibault Clavier, Corinne Pinel, Hidde de Jong, Johannes Geiselmann (2024). Improving the genetic stability of bacterial growth control for long\u2010term bioproduction. Biotechnol Bioeng 121(9):2808-19. <a href=\"https:\/\/hal.science\/INRIA2\/hal-04880509v1\">[Hal preprint]<\/a><\/li>\n\n\n\n<li>Javier Innerarity Imizcoz, Walid Djema, Francis Mairet, Jean-Luc Gouz\u00e9 (2024). Optimal resource allocation in micro-organisms under periodic nutrient fluctuations. Journal of Theoretical Biology, 7:595:111953. <a href=\"https:\/\/hal.science\/hal-04726319v1\">[Hal preprint]<\/a><\/li>\n\n\n\n<li>Rand Asswad, Walid Djema, Olivier Bernard, Jean-Luc Gouz\u00e9, Eugenio Cinquemani (2024). Optimization of microalgae biosynthesis via controlled algal-bacterial symbiosis. CDC 2024 &#8211; 63rd IEEE Conference on Decision and Control, IEEE CSS, Dec 2024, Milan, Italy. pp.1-6. <a href=\"https:\/\/hal.science\/hal-04727571v1\">[Hal preprint]<\/a><\/li>\n\n\n\n<li>Javier Innerarity Imizcoz, Walid Djema, Francis Mairet, Jean-Luc Gouz\u00e9 (2024). Optimal cell growth under periodic environment. MTNS 2024 &#8211; 26th International Symposium on Mathematical Theory of Networks and Systems, Aug 2024, Cambridge (Angleterre), United Kingdom. <a href=\"https:\/\/hal.science\/hal-04724783v1\">[Hal preprint]<\/a><\/li>\n\n\n\n<li>Rand Asswad, Eugenio Cinquemani, Jean-Luc Gouz\u00e9 (2024). Kalman-based approaches for online estimation of bioreactor dynamics from fluorescent reporter measurements. ECC 2024 &#8211; European Control Conference, Jun 2024, Stockholm, Sweden. pp.1-6. <a href=\"https:\/\/hal.science\/hal-04556535v1\">[Hal preprint]<\/a><\/li>\n\n\n\n<li>Agust\u00edn Gabriel Yabo, Jean-Baptiste Caillau, Jean-Luc Gouz\u00e9 (2024). Optimal bacterial resource allocation strategies in batch processing. SIAM Journal on Applied Mathematics, 2024, pp.S567-S591. <a href=\"https:\/\/hal.science\/hal-03710681v2\">[Hal preprint]<\/a><\/li>\n\n\n\n<li>Bruno Assis Pessi, Olivier Bernard (2024). Dynamical metabolic model for optimizing biotin-regulated lipid production in microalgae-bacteria symbiosis. In Proc. of the 2th IFAC International Symposium on Advanced Control of Chemical Processes (ADCHEM), Toronto, Canada, Jul 2024, IFAC-PapersOnLine 58(14):152-7. <a href=\"https:\/\/inria.hal.science\/hal-04871726\">[Hal preprint]<\/a><\/li>\n\n\n\n<li>Juan Carlos Arceo, Olivier Bernard, Jean-Luc Gouz\u00e9 (2023). Observer Design via Non-Monotone Lyapunov Functions for Monitoring Heterotrophic Microalgae. 22nd IFAC World Congress, 2023, Yokohama, Japan. <a href=\"https:\/\/hal.science\/hal-04229860v1\">[Hal preprint]<\/a><\/li>\n\n\n\n<li>Carlos Martinez, Eugenio Cinquemani, Hidde de Jong, Jean-Luc Gouz\u00e9 (2023). Optimal protein production by a synthetic microbial consortium: Coexistence, distribution of labor, and syntrophy. Journal of Mathematical Biology, 2023, 87 (1), pp.1-37. <a href=\"https:\/\/hal.science\/hal-03525249v1\">[Hal preprint]<\/a><\/li>\n\n\n\n<li>Bruno Assis Pessi, Caroline Baroukh, Anais Bacquet, Olivier Bernard (2023). A universal dynamical metabolic model representing mixotrophic growth of Chlorella sp. on wastes. Water Research, 2023, 229, pp.119388. <a href=\"https:\/\/hal.science\/hal-03920752v1\">[Hal preprint]<\/a><\/li>\n\n\n\n<li>Alex dos Reis de Souza, Denis Efimov, Andrey Polyakov, Jean-Luc Gouz\u00e9, Eugenio Cinquemani (2023). State observation in microbial consortia: A case study on a synthetic producer-cleaner consortium. Int J Robust Nonlinear Control 33(9):5011\u20135022 <a href=\"https:\/\/hal.science\/hal-03495889\/\">[Hal]<\/a><a href=\"https:\/\/onlinelibrary.wiley.com\/doi\/10.1002\/rnc.5945\"> <\/a><a href=\"https:\/\/onlinelibrary.wiley.com\/doi\/10.1002\/rnc.5945\">[Open access]<\/a><\/li>\n\n\n\n<li>Francesca Casagli, Olivier Bernard (2022). Simulating biotechnological processes affected by meteorology: Application to algae\u2013bacteria systems. Journal of Cleaner Production, 2022, 377, pp.134190. <a href=\"https:\/\/hal.science\/hal-03935662v1\">[Hal preprint]<\/a><\/li>\n\n\n\n<li>Antrea Pavlou, Eugenio Cinquemani, Johannes Geiselmann, Hidde de Jong (2022). Maturation models of fluorescent proteins are necessary for unbiased estimates of promoter activity. Biophysical Journal, 2022, 121 (21), pp.4179-4188. <a href=\"https:\/\/hal.science\/hal-03938428v1\">[Hal preprint]<\/a><\/li>\n\n\n\n<li>Jean-Baptiste Caillau, Walid Djema, Jean-Luc Gouz\u00e9, Sofya Maslovskaya, Jean-Baptiste Pomet (2022). Turnpike property in optimal microbial metabolite production. Journal of Optimization Theory and Applications 194 :375\u2013407. <a href=\"https:\/\/hal.science\/hal-03328686v2\">[Hal preprint]<\/a><\/li>\n\n\n\n<li>Olivier Bernard, Liu-Di Lu (2022). Optimal optical conditions for Microalgal production in photobioreactors. Journal of Process Control 112:69-77. <a href=\"https:\/\/hal.science\/hal-03323094v3\/\">[Hal preprint]<\/a><\/li>\n\n\n\n<li>Juan Carlos Arceo, Olivier Bernard, Jean-Luc Gouz\u00e9 (2022). Model of bacteria mutualism in a chemostat: Analysis and optimization with interval detector. In Proc. of the 61st IEEE Conference on Decision and Control (CDC), Canc\u00fan, Mexico, Dec 2022, pp.3225-3230. <a href=\"https:\/\/inria.hal.science\/hal-03903952\">[Hal preprint]<\/a><\/li>\n<\/ul>\n\n\n\n<p><\/p>","protected":false},"excerpt":{"rendered":"<p> <a class=\"continue-reading-link\" href=\"https:\/\/project.inria.fr\/ctrlab\/publications\/\"><span>Continue reading<\/span><i class=\"crycon-right-dir\"><\/i><\/a> <\/p>\n","protected":false},"author":1918,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-88","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/project.inria.fr\/ctrlab\/wp-json\/wp\/v2\/pages\/88","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/project.inria.fr\/ctrlab\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/project.inria.fr\/ctrlab\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/project.inria.fr\/ctrlab\/wp-json\/wp\/v2\/users\/1918"}],"replies":[{"embeddable":true,"href":"https:\/\/project.inria.fr\/ctrlab\/wp-json\/wp\/v2\/comments?post=88"}],"version-history":[{"count":12,"href":"https:\/\/project.inria.fr\/ctrlab\/wp-json\/wp\/v2\/pages\/88\/revisions"}],"predecessor-version":[{"id":167,"href":"https:\/\/project.inria.fr\/ctrlab\/wp-json\/wp\/v2\/pages\/88\/revisions\/167"}],"wp:attachment":[{"href":"https:\/\/project.inria.fr\/ctrlab\/wp-json\/wp\/v2\/media?parent=88"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}