- Téo Lemane, Paul Medvedev, Rayan Chikhi, Pierre Peterlongo, kmtricks: Efficient and flexible construction of Bloom filters for large sequencing data collections, Bioinformatics Advances, 2022;, vbac029.
- Giulia Bassignana, Jennifer Fransson, Vincent Henry, Olivier Colliot, Violetta Zujovic, et al.. Step-wise target controllability identifies dysregulated pathways of macrophage networks in multiple sclerosis. Network Neuroscience, MIT Press, 2021, 5 (2), pp.337-357.
- Vincent Henry, Ivan Moszer, Olivier Dameron, Laura Vila Xicota, Bruno Dubois, et al.. Converting disease maps into heavyweight ontologies: general methodology and application to Alzheimer’s disease. Database – The journal of Biological Databases and Curation, Oxford University Press, 2021, pp.1-33.
- Ninon Burgos, Simona Bottani, Johann Faouzi, Elina Thibeau-Sutre, Olivier Colliot. Deep learning for brain disorders: from data processing to disease treatment. Briefings in Bioinformatics, Oxford University Press (OUP), 2021, 22 (2), pp.1560-1576.
- Johann Faouzi, Baptiste Couvy-Duchesne, Samir Bekadar, Olivier Colliot, Jean-Christophe Corvol. Exploratory analysis of the genetics of impulse control disorders in Parkinson’s disease using genetic risk scores. Parkinsonism and Related Disorders, Elsevier, 2021, 86, pp.74 – 77.
- Pascal Lu, Olivier Colliot. Multilevel Survival Modeling with Structured Penalties for Disease Prediction from Imaging Genetics data. IEEE Journal of Biomedical and Health Informatics, Institute of Electrical and Electronics Engineers, 2021, pp.1-1.
- Manon Ansart, Stéphane Epelbaum, Giulia Bassignana, Alexandre Bône, Simona Bottani, et al.. Predicting the Progression of Mild Cognitive Impairment Using Machine Learning: A Systematic, Quantitative and Critical Review. Medical Image Analysis, Elsevier, 2021, 67, pp.101848.
- Virgilio Kmetzsch, Vincent Anquetil, Dario Saracino, Daisy Rinaldi, Agnès Camuzat, et al.. Plasma microRNA signature in presymptomatic and symptomatic subjects with C9orf72-associated frontotemporal dementia and amyotrophic lateral sclerosis. Journal of Neurology, Neurosurgery and Psychiatry, BMJ Publishing Group, 2020, 92 (5), pp.485-493
- Lydia Chougar, Johann Faouzi, Nadya Pyatigorskaya, Lydia Yahia‐cherif, Rahul Gaurav, et al.. Automated Categorization of Parkinsonian Syndromes Using Magnetic Resonance Imaging in a Clinical Setting. Movement Disorders, Wiley, 2020
- Giulia Bassignana, Olivier Colliot, Fabrizio de Vico Fallani. A step-wise criterion to determine target control centrality in the aging brain network. NetSci 2020 – International School and Conference on Network Science, Sep 2020, Rome / Virtual, Italy
- Vincent Henry, Giulia Bassignana, Fabrizio De Vico Fallani, Olivier Dameron, Ivan Moszer, and Olivier Colliot. Conciliation of medicine systems disease maps and other molecular interaction networks using logical properties of ontology . 4rd Disease Maps Community Meeting, Oct 2019, Sevilla, Spain
- Johann Faouzi, Samir Bekadar, Olivier Colliot, and Jean-Christophe Corvol. Predicting Impulse Control Disorders in Parkinson’s Disease: A Challenging Task. International Congress of Parkinson’s Disease and Movement Disorders, September 2019, Nice, France.
- Vincent Henry, Giulia Bassignana, Fabrizio De Vico Fallani, Olivier Dameron, Ivan Moszer, and Olivier Colliot. Conciliation of process description and molecular interaction networks using logical properties of ontology. Journées Ouvertes Biologie, Informatique et Mathématiques (JOBIM), Jul 2019, Nantes, France.
- Giulia Bassignana, Jennifer Fransson, Olivier Colliot, Violetta Zujovic and Fabrizio De Vico Fallani. Target controllability in genetic networks of macrophage activation. International School and Conference on Network Science (NetSci), May 2019, Burlington, Vermont.
- Vincent Henry, Ivan Moszer, Olivier Dameron, Marie-Claude Potier, Martin Hofmann-Apitius, et al.. Converting Alzheimer’s disease map into a heavyweight ontology: a formal network to integrate data. Data Integration in the Life Sciences (DILS2018), Nov 2018, Hannover, Germany
- Vincent Henry, Ivan Moszer, Olivier Dameron, Marie-Claude Potier, Martin Hofmann-Apitius, et al.. Integrating ontological representation and reasoning into a disease map: application to Alzheimer’s disease. 3rd Disease Maps Community Meeting, Jun 2018, Paris, France
- Giulia Bassignana, Jennifer Fransson, Olivier Colliot, Violetta Zujovic, Fabrizio de Vico Fallani. Identification of Driver Nodes in Genetic Networks Regulating Macrophage Activation. Conference on Complex Systems – CSS, Sep 2018, Thessaloniki, Greece.
- Giulia Bassignana, Jennifer Fransson, Olivier Colliot, Violetta Zujovic and Fabrizio De Vico Fallani. Identification of driver nodes in genetic networks regulating macrophage activation. International School and Conference on Network Science (NetSci), Jun 2018, Paris, France.
