

{"id":565,"date":"2013-01-10T10:08:56","date_gmt":"2013-01-10T09:08:56","guid":{"rendered":"https:\/\/project.inria.fr\/plasma-lab\/?page_id=565"},"modified":"2015-03-17T17:50:16","modified_gmt":"2015-03-17T16:50:16","slug":"chemical","status":"publish","type":"page","link":"https:\/\/project.inria.fr\/plasma-lab\/examples\/chemical\/","title":{"rendered":"Chemical"},"content":{"rendered":"<p><\/p>\n<h3>Algorithm<\/h3>\n<p>Using our Biological simulator we constructed a toy example.<\/p>\n<div class=\"alert alert-success\" role=\"alert\"><p class=\"printonly\"><strong>Important!<\/strong><\/p><\/p>\n<p class=\"first-p\">species A=1000,B=1000,C,D,E<\/p>\n<p>A + B -&gt; C<br \/>\nC -&gt; D<br \/>\nD -&gt; E<\/p>\n<p><\/div>\n<p style=\"text-align: center;\"><strong>Download :<a href=\"http:\/\/plasma-lab.gforge.inria.fr\/plasma_lab_examples\/Bio\/Chemical.plasma\"> Chemical.plasma<\/a><\/strong><\/p>\n<hr \/>\n<h3><\/h3>\n<h3>Requirement<\/h3>\n<p>And here is the corresponding property which means <em>&#8220;Fatally D will be greater than 400 before 2000 step&#8221;<\/em>.<\/p>\n<div class=\"alert alert-success\" role=\"alert\"><p class=\"printonly\"><strong>Important!<\/strong><\/p><\/p>\n<p class=\"first-p\">F&lt;=#2000 D&gt;400<\/p>\n<p><\/div>\n<p>You can chech this property with <strong>Montecarlo method<\/strong> and a<strong> samplecount parameter of 10000<\/strong>. This will generate 10000 execution traces and check the property on each one of these traces.<\/p>\n<p>As you can see on this property, the Fatally operator is bounded by a variable. This allows you to set a range of bound values for this operator, thus generating and checking a different property for each value of this range.<\/p>\n<p>You can create multiple property and check them at the same time, <strong>set the bound variable to range from 1000 to 3000 with an increment of 100<\/strong>.<\/p>\n<ul>\n<li>F&lt;=#1000 D&gt;400<\/li>\n<li>F&lt;=#1100 D&gt;400<\/li>\n<li>&#8230;<\/li>\n<li>F&lt;=#3000 D&gt;400<\/li>\n<\/ul>\n<p>After Plasma Lab has completed the experiment, you can generate a plot to see how this bound influence your results.<\/p>\n<p><div id=\"attachment_625\" style=\"width: 310px\" class=\"wp-caption aligncenter\"><a href=\"https:\/\/project.inria.fr\/plasma-lab\/files\/2013\/01\/plot.png\"><img loading=\"lazy\" decoding=\"async\" aria-describedby=\"caption-attachment-625\" class=\"size-medium wp-image-625\" title=\"plot\" alt=\"\" src=\"https:\/\/project.inria.fr\/plasma-lab\/files\/2013\/01\/plot-300x227.png\" width=\"300\" height=\"227\" srcset=\"https:\/\/project.inria.fr\/plasma-lab\/files\/2013\/01\/plot-300x227.png 300w, https:\/\/project.inria.fr\/plasma-lab\/files\/2013\/01\/plot.png 688w\" sizes=\"auto, (max-width: 300px) 100vw, 300px\" \/><\/a><p id=\"caption-attachment-625\" class=\"wp-caption-text\">Results plot in Plasma Lab<\/p><\/div><\/p>","protected":false},"excerpt":{"rendered":"<p>Algorithm Using our Biological simulator we constructed a toy example. Download : Chemical.plasma Requirement And here is the corresponding property which means &#8220;Fatally D will be greater than 400 before 2000 step&#8221;. You can chech this property with Montecarlo method and a samplecount parameter of 10000. This will generate 10000\u2026<\/p>\n<p> <a class=\"continue-reading-link\" href=\"https:\/\/project.inria.fr\/plasma-lab\/examples\/chemical\/\"><span>Continue reading<\/span><i class=\"crycon-right-dir\"><\/i><\/a> <\/p>\n","protected":false},"author":234,"featured_media":0,"parent":236,"menu_order":0,"comment_status":"closed","ping_status":"open","template":"","meta":{"footnotes":""},"class_list":["post-565","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/project.inria.fr\/plasma-lab\/wp-json\/wp\/v2\/pages\/565","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/project.inria.fr\/plasma-lab\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/project.inria.fr\/plasma-lab\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/project.inria.fr\/plasma-lab\/wp-json\/wp\/v2\/users\/234"}],"replies":[{"embeddable":true,"href":"https:\/\/project.inria.fr\/plasma-lab\/wp-json\/wp\/v2\/comments?post=565"}],"version-history":[{"count":32,"href":"https:\/\/project.inria.fr\/plasma-lab\/wp-json\/wp\/v2\/pages\/565\/revisions"}],"predecessor-version":[{"id":1947,"href":"https:\/\/project.inria.fr\/plasma-lab\/wp-json\/wp\/v2\/pages\/565\/revisions\/1947"}],"up":[{"embeddable":true,"href":"https:\/\/project.inria.fr\/plasma-lab\/wp-json\/wp\/v2\/pages\/236"}],"wp:attachment":[{"href":"https:\/\/project.inria.fr\/plasma-lab\/wp-json\/wp\/v2\/media?parent=565"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}