Journals
- F. De Moor, O. Boullé, D. Lavenier, De-Bruijn graph partitioning for scalable and accurate DNA storage processing, Bioinformatics, Volume 41, Issue 11, November 2025, btaf618
- C. Berton, G. Coatrieux, H. Gasnier, S. Haddad, R. Bellafqira and D. Lavenier, “A Dynamic Sliding Window Encoding for Secured DNA Data Storage Compliant With Biological and Indexing Constraints,” in IEEE Access, vol. 13, pp. 66009-66030, 2025
- J. Leblanc, O. Boulle, E. Roux, J. Nicolas, D. Lavenier, Y. Audic”, Fully in vitro iterative construction of a 24 kb-long artificial DNA sequence to store digital information”, in BioTechniques, vol. 76, no. 5, pp. 203-215, 2024
- B. Hamoum and E. Dupraz, “Channel Model and Decoder With Memory for DNA Data Storage With Nanopore Sequencing,” in IEEE Access, vol. 11, pp. 52075-52087, 2023
Conferences
- J. Mateos, D. Lavenier, M. Dimopoulou, A. Genot, M. Antonini, Primer design for DNA storage random access. CORESA 2024 – 23ème conférence sur COmpression et REprésentation des Signaux Audiovisuels, Nov 2024, Rennes, France. pp.1-3.
- C. Berton, G. Coatrieu, D. Lavenier, S. Haddad, Dynamic sliding window encoding for data storage on DNA under biological and indexing constraints, EUSIPCO2023, 31st European Signal Processing Conference, Helsinki, Finland, September 2023
- B. Hamoum, A. Ezzeddine, E. Dupraz, Synchronization algorithms from high-rate LDPC codes for DNA data storage, Rhodes, 24th International Conference on Digital Signal Processing, Island of Rhodes, Greece, June 2023.
- D. Lavenier, DNA Storage: Synthesis and Sequencing Semiconductor Technologies, 68th Annual IEEE International Electron Devices Meeting, San Francisco, Dec. 2022 [HAL]
- B. Hamoum, E. Dupraz, L. Conde-Canencia, A DNA Data Storage Channel Model Trained on Genomic Data with Nanopore Sequencing, DSMM 2022, 1st International Conference on Data Storage in Molecular Media, 21-23 March 2022, virtual conference [abstract][slides]
- C. Berton, G. Coatrieux, D. Lavenier, A first proposal for secure data storage into DNA molecules compliant with biological constraints, DSMM 2022, 1st International Conference on Data Storage in Molecular Media, 21-23 March 2022, virtual conference [abstract] [slides]
- O. Boullé, D. Lavenier, Experimental DNA storage platform, DSMM 2022, 1st International Conference on Data Storage in Molecular Media, 21-23 March 2022, virtual conference [abstract] [slides]
- B. Hamoum, E. Dupraz, L. Conde-Canencia, D. Lavenier, Channel Model with Memory for DNA Data Storage with Nanopore Sequencing, 2021 11th International Symposium on Topics in Coding, ISTC 2021, HAL
PhD
- Chloé Berton. Sécurité des données stockées sur molécules d’ADN. Informatique [cs]. Ecole nationale supérieure Mines-Télécom Atlantique, 2024 (Document )
- Belaid Hamoum, DNA data storage algorithms and synchronization, PhD Thesis, UBS, Dec. 15, 2022 (Document)
Talks
- D. Lavenier, Information Storage on DNA, Journée scientifique du L2TI, Paris, déc. 2024
- E. Dupraz, Codage canal pour le stockage de données dans l’ADN, Cérémonie de remise des prix IMT-Académie des sciences, octobre 2024
- D. Lavenier, DNA Storage, CORESA 2024, Rennes, nov. 2024.
- E. Dupraz, An accurate channel Model with memory for DNA data storage, Journée GdR IASIS, Juillet 2023
- D. Lavenier, Tutoriel: DNA Storage Overview, Journée GdR IASIS, Paris, Juillet 2023
- D. Lavenier, Data Storage on DNA, Big Day 2022, Journée Master Bio-informatique de Rennes, nov. 2022
- D. Lavenier, Data Storage on Synthetic DNA, Séminire IRSET, Rennes, mars 2023
- D. Lavenier, Data Storage on DNA, Invited Speaker, IDA 2022, Symposium on Intelligent Data Analysis, 20-22 April 2022, Rennes, France
- D. Lavenier, Stockage d’information sur ADN, Séminaires IBNM (Institut Brestois du Numérique et des Mathématiques), 18 novembre 2021, Brest, France
- D. Lavenier, Le projet dnarXiv : archivage de l’information sur ADN, Colloque ADN, polymères et big data, 26 octobre 2020, Paris, France
Reports
- D. Lavenier, Constrained Consensus Sequence Algorithm for DNA Archiving, arXiv, May 2021
- A. Badoual, Stockage d’information sur ADN, Rapport stage M1, Univ. Rennes 1, Juin 2019 (rapport)
- B. Hamoum, Systèmes de stockage de données sur ADN, Rapport stage M2, UBS, Juin 2019 (rapport)
Posters
- J. Leblanc, D. Lavenier, O. Boullé, Y. Audic, G. Andrade-Barosso, DNAmaker: High-Throughput Automated Construction of Multi-Kilobase DNA Molecules for Digital Data, MoleculArXiv Autumn School, IESC Cargèse, Corse, 2025 (Poster)
- O. Boullé, F. De Moor, J. Leblanc, D. Lavenier, De Bruijn Graph Partitioning for Scalable and accurate DNA Storage Processing, MoleculArXiv Autumn School, IESC Cargèse, Corse, 2025 (Poster)
- C. Berton, G. Coatrieux, D. Lavenier, Secure data storage into DNA molecules compliant with biological constraints. Ensuring the confidentiality of data stored into DNA molecules, Journées RITS, Recherche en Imagerie et Technologies pour la Santé, Brest, Mai 2022 (Poster)
- C. Berton, G. Coatrieux, D. Lavenier, Secure data storage into DNA molecules compliant with biological constraints, Colloque gestion de crise et numérique : nouvelles menaces et nouvelles solutions, mars 2022, IMT, Palaiseau (Poster)
- L. Conde-Canencia, B. Hamoum, D. Lavenier, Error Correction Schmes for DNA Storage with Nanopore Sequencing, JOBIM 2019, Jul. 2019, Nantes (abstract)
- L. Conde-Canencia, B. Hamoum, D. Lavenier, E. Roux, Advanced Coding Schemes for DNA-based storage using nanopore sequencing technologies, CominLabs days, Nov. 2019, (Poster)
Popularisation article
- D. Lavenier, M. Antonini, A. Genot, Y. Rondelez, Stocker les données : la piste prometteuse de l’ADN, Interstices, Janvier 2023
- D. Lavenier, M. Antonini. Stockage d’information sur ADN. Le calcul à découvert, CNRS
Editions, 2025, 978-2-271-15373-9 (link)