RNANR – Non-redundant sampling and generation of locally optimal structures

RNANR stands for RNA Non-Redundantly. It is a software that allows to exhaustively generate all locally optimal secondary structures of given RNA sequence using Nussinov energy model. It also contains non-redundant sampler (hence the name, though exhaustive generation is also in itself non redundant ;)) which returns samples based on their Boltzmann probability, which is computed using Turner energy model.

To access the source code of RNANR, please visit this link:


For more information, please see README located in there. This will give you description of an installation process and of options you can use.

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