News – SHANOIR

Access request rework in Shanoir: A public catalog for more FAIRness

jdouteau 2023/02/17 2023/02/17Uncategorized

Shanoir is trying to be more FAIR (Findable, Accessible, Interoperable, Reusable), we are currently developing features for studies to be able to respect these, while keeping our security on top level. A new catalog of public studies is now available at the start page of Shanoir. You can easily join…

Shanoir for FAIR

mkain 2022/11/16 2022/11/16Uncategorized

We will very soon release a new version of Shanoir, v1.4.3, that will bring Shanoir further on the FAIR principles. We will expose publicly findable meta-data from schema.org, that declares a Shanoir server instance is a DataCatalog. This is the first step of multiple upcoming steps to make data in…

Study restriction by center

jdouteau 2022/09/16 2022/09/16Uncategorized

A short video to present a new security feature, limit study by center. It is now possible to limit the visibility of a study user to certain centers.

[Demonstration] OHIF viewer: save measurements

mkain 2022/09/09 2022/09/09Uncategorized

Solr criteria filtering

jlouis 2022/03/22 2022/03/22Uncategorized

The Shanoir Solr search feature has been improved ! You can now filter criteria values by keyword : Values can now be ordered by name or by number of corresponding datasets : It’s also now possible to explore every value of a criteria, there is no longer a limit…

New feature: BIDS import

jdouteau 2022/03/14 2022/03/14Uncategorized

A previous feature in Shanoir allowed to export data as BIDS: https://project.inria.fr/shanoir/demonstration-bids-integration-in-shanoir/ It is now possible in Shanoir to import data from a BIDS folder, and therefore from raw nifti or other unsupported data type until now as IEEG. As BIDS folder are generally quite massive folder, we propose a…

New feature: Subject prefix by center

jdouteau 2022/02/03 2022/02/03Uncategorized

It is now possible to define a subject name prefix for every center associated to a study. This allows to have a better and standardize subject naming along the study. Example: – every subject from center Grenoble will have to start with “GRE-” – every subject from center Rennes will…

[Demonstration] BIDS integration in Shanoir

jdouteau 2022/01/25 2022/01/25Uncategorized

New feature: Dataset processing

jdouteau 2021/12/15 2021/12/15Uncategorized

Dataset processing Dataset processing is an important part of neuro-imaging. Images can be processed for image segmentation, calibration, filtering and others procedures that will produce enhanced images. These images should be kept along with original ones. This is now possible in Shanoir to define a dataset processing with one or…

Now migrated to Spring Boot 2 and Java 11

mkain 2021/12/10 2021/12/10Uncategorized

Shanoir-NG is now based on Spring Boot 2.4.5 and Java 11 to assure, that all technical frameworks Shanoir-NG is based on, remain up-to-date for all upcoming future extensions.