We experimented recently with some MRI sequences, that reached the size of up to 30Gb per examination and could successfully import them into Shanoir, after some server configuration.
Shanoir is trying to be more FAIR (Findable, Accessible, Interoperable, Reusable), we are currently developing features for studies to be able to respect these, while keeping our security on top level. A new catalog of public studies is now available at the start page of Shanoir. You can easily join…
We will very soon release a new version of Shanoir, v1.4.3, that will bring Shanoir further on the FAIR principles. We will expose publicly findable meta-data from schema.org, that declares a Shanoir server instance is a DataCatalog. This is the first step of multiple upcoming steps to make data in…
A short video to present a new security feature, limit study by center. It is now possible to limit the visibility of a study user to certain centers.
The Shanoir Solr search feature has been improved ! You can now filter criteria values by keyword : Values can now be ordered by name or by number of corresponding datasets : It’s also now possible to explore every value of a criteria, there is no longer a limit…
A previous feature in Shanoir allowed to export data as BIDS: https://project.inria.fr/shanoir/demonstration-bids-integration-in-shanoir/ It is now possible in Shanoir to import data from a BIDS folder, and therefore from raw nifti or other unsupported data type until now as IEEG. As BIDS folder are generally quite massive folder, we propose a…
It is now possible to define a subject name prefix for every center associated to a study. This allows to have a better and standardize subject naming along the study. Example: – every subject from center Grenoble will have to start with “GRE-” – every subject from center Rennes will…
Dataset processing Dataset processing is an important part of neuro-imaging. Images can be processed for image segmentation, calibration, filtering and others procedures that will produce enhanced images. These images should be kept along with original ones. This is now possible in Shanoir to define a dataset processing with one or…
