jdouteau – SHANOIR

Articles posted by jdouteau

Access request rework in Shanoir: A public catalog for more FAIRness

jdouteau 2023/02/17 2023/02/17Uncategorized

Shanoir is trying to be more FAIR (Findable, Accessible, Interoperable, Reusable), we are currently developing features for studies to be able to respect these, while keeping our security on top level. A new catalog of public studies is now available at the start page of Shanoir. You can easily join…

Study restriction by center

jdouteau 2022/09/16 2022/09/16Uncategorized

A short video to present a new security feature, limit study by center. It is now possible to limit the visibility of a study user to certain centers.

New feature: BIDS import

jdouteau 2022/03/14 2022/03/14Uncategorized

A previous feature in Shanoir allowed to export data as BIDS: https://project.inria.fr/shanoir/demonstration-bids-integration-in-shanoir/ It is now possible in Shanoir to import data from a BIDS folder, and therefore from raw nifti or other unsupported data type until now as IEEG. As BIDS folder are generally quite massive folder, we propose a…

New feature: Subject prefix by center

jdouteau 2022/02/03 2022/02/03Uncategorized

It is now possible to define a subject name prefix for every center associated to a study. This allows to have a better and standardize subject naming along the study. Example: – every subject from center Grenoble will have to start with “GRE-” – every subject from center Rennes will…

[Demonstration] BIDS integration in Shanoir

jdouteau 2022/01/25 2022/01/25Uncategorized

New feature: Dataset processing

jdouteau 2021/12/15 2021/12/15Uncategorized

Dataset processing Dataset processing is an important part of neuro-imaging. Images can be processed for image segmentation, calibration, filtering and others procedures that will produce enhanced images. These images should be kept along with original ones. This is now possible in Shanoir to define a dataset processing with one or…

New feature: Tags in Shanoir

jdouteau 2021/10/14 2021/10/14Uncategorized

The idea of this feature is to allow users to put specific labels on subjects with colored tags. These tags can convey informations such as clinical scores of relevant information to discriminate subjects. Then the user will be able to filter subjects using these tags. Usage example: I have a…